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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816359.1_cds_XP_016498766.1_12757
CDS Infomation

[gene=LOC107817451] [db_xref=GeneID:107817451] [protein=vesicle-fusing ATPase-like] [protein_id=XP_016498766.1] [location=join(46384..46559,48141..48236,48328..48409,48693..48743,50097..50264,50387..50541,50673..50781,50915..51014,51091..51146,51681..51746,51860..51942,52076..52209,52462..52672,53149..53280,53349..53409,53513..53572,53700..53758,53832..53919,54960..55082,55862..55927,56112..56255)] [gbkey=CDS]
Sequence

ATGGCAGGGAGATTTGGTTCCGGAGCATCGACGATGATCGTAACGAACACGCCGGCGAAA
GATCTCGCTTACACAAATTGCGCATATTGCTCTCCGGCGGATCTCAGAAACTTCCTTGTT
CCTGGATCTAAGCTCGCTTATGCACTTATCGCTGATGCTTTTGTTCTCACTTTAGCTGCC
CACGATGCCATTCCTAATGGTCATCTTGGTCTTAATGCGATTCAAAGACGCTATGCCAAA
GTTTCCACTGGAGACACTATATCTGTTAACAGATTTGTTCCACCGGATGACTTCAACCTT
GCTCTGCTTACCCTTGACTTGGAGTTTGTGAAAAAAGGGACCAAAGATGAGCAGGTAGAT
GCAGTTTCTTTGGCTAATCAAGTTCGTAAGAGATTTGCTAATCAGATTATGTCAACTGGG
CAAAAGGTGACATTTGAGTATCATGGCAATGGTTATATATTCACCGTGAATCAAGCTACT
GTGGAGGGGCAAGAAAAATCTAATATCGAAAGAGGGATGATTTCAGCTGACACATACATT
ATATTTGAAGCTGCAAACTCTAGTGGAATAAAGATTGTCAACCAGCGTGAAGCTGCTAGC
AGCAGCATCTTTAGACAGAAAGAATTCAATCTTCAATCATTGGGTATAGGTGGTCTGAGT
GCAGAGTTTGCTGATATATTTCGAAGAGCTTTTGCTTCCAGGGTTTTCCCTCCACATGTG
ACCAGCAAGCTTGGTATCAAGCATGTCAAGGGAATGCTGCTCTATGGACCTCCTGGTACA
GGGAAGACTCTAATGGCTCGGCAGATTGGAAAAATGCTAAATGGCAAGGAACCAAAGATT
GTCAATGGACCAGAAGTATTAAGCAAGTTTGTCGGTGAAACAGAAAAAAATGTGAGGGAT
TTGTTTGCTGATGCTGAGCAGGACCAAAGAACCAAAGGTGACCAAAGTGAACTGCATGTT
ATCATTTTTGACGAGATTGATGCAATCTGTAAGTCTAGAGGATCAACTAGAGATGGAACT
GGTGTACATGACAGCATTGTTAACCAGCTTCTCACTAAGATAGACGGGGTGGAATCTCTG
AATAATGTTTTGCTCATTGGAATGACAAATAGGAAAGATCTGCTTGATGAAGCACTTATG
AGGCCAGGACGACTAGAAGTCCAAGTGGAGATAAGCCTTCCTGATGAAAATGGTCGACTG
CAAATTCTCCAGATTCATACAAACCAGATGAAAGAGAATTCCTTTCTTTCCCCTGATGTG
AACTTGCAAGAACTTGCCGCAAGGACAAAAAATTATAGTGGTGCTGAGCTTGAAGGTGTA
GTCAAAAGTGCTGTATCCTTTGCATTGAACAGGCAGCTAAGCATGGATGATCTTACTAAA
CCAGTGGATGAGGAGAGTATAAAAGTCACTATGGATGACTTTTTGCATGCCCTTGGTGAA
GTAAGACCTGCATTTGGTGCTTCCACTGATGACCTTGAACGTTGCAGACTTAATGGCATT
GTGGACTGTGGCGAACGACATCAACACATCTACAGAAGAACTATGCTATTGGCAGAACAA
GTTAAAGTCAGCAGGGGGAGCCCCCTTATTACTTGTCTTCTGGAAGGCCCAAGTGGAAGT
GGCAAAACTGCAATGGCAGCAACAGTTGGAATTGAAAGTGATTTTCCCTATGTCAAGATA
ATTTCTGCTGAAACTATGATTGGGCTCAGTGAAAGCAGCAAATGTGCTCAGATTGTAAAG
GTATTTGAGGATGCGTACAAGTCACCACTTAGCATAGTCGTCCTTGATGGCATTGAAAGG
CTTCTGGAATATGTTGCAATTGGCCCTCGGTTTTCAAATTTGATTTCTCAAACACTGTTG
GTGCTCCTCAAACGGCTTCCACCTAAGGGTAAAAAAATTCTCGTGATTGGAACTACTAGT
GAGGCCGGTTTCTTGGACTCGGTTGGCCTTTGTGATGCTTTCTCGGTCACATACCATGTT
CCAACACTAAAGACAGAAGATGCCAAGAAGGTGTTACAACAACTTAATGTCTTCTCAAAT
GATGATGTTGATTCTGCTGCTGAGGCATTAAATGACATGCCCATCAAGAAACTATACATG
GTTGTCGAAATGGCTGCTCAGGGTGAACATGGTGGGACAGCAGAAGCCATCTATTCTGGC
AAAGAGAAGATCCAAATCTCACATTTCTATGATTGCCTTCAGGACATTGCTCGATATTGA

Peptide Sequence

PEP ID

XP_016498766.1
PEP Infomation

PREDICTED: vesicle-fusing ATPase-like [Nicotiana tabacum]
Sequence

MAGRFGSGASTMIVTNTPAKDLAYTNCAYCSPADLRNFLVPGSKLAYALIADAFVLTLAA
HDAIPNGHLGLNAIQRRYAKVSTGDTISVNRFVPPDDFNLALLTLDLEFVKKGTKDEQVD
AVSLANQVRKRFANQIMSTGQKVTFEYHGNGYIFTVNQATVEGQEKSNIERGMISADTYI
IFEAANSSGIKIVNQREAASSSIFRQKEFNLQSLGIGGLSAEFADIFRRAFASRVFPPHV
TSKLGIKHVKGMLLYGPPGTGKTLMARQIGKMLNGKEPKIVNGPEVLSKFVGETEKNVRD
LFADAEQDQRTKGDQSELHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVESL
NNVLLIGMTNRKDLLDEALMRPGRLEVQVEISLPDENGRLQILQIHTNQMKENSFLSPDV
NLQELAARTKNYSGAELEGVVKSAVSFALNRQLSMDDLTKPVDEESIKVTMDDFLHALGE
VRPAFGASTDDLERCRLNGIVDCGERHQHIYRRTMLLAEQVKVSRGSPLITCLLEGPSGS
GKTAMAATVGIESDFPYVKIISAETMIGLSESSKCAQIVKVFEDAYKSPLSIVVLDGIER
LLEYVAIGPRFSNLISQTLLVLLKRLPPKGKKILVIGTTSEAGFLDSVGLCDAFSVTYHV
PTLKTEDAKKVLQQLNVFSNDDVDSAAEALNDMPIKKLYMVVEMAAQGEHGGTAEAIYSG
KEKIQISHFYDCLQDIARY

Transcript Sequence

Gene sequence data has not been registered.